TY - BOOK AU - Persing, David H. AU - Tenover, Fred C. AU - Hayden, Randall T. TI - Molecular microbiology: : diagnostic principles and practice SN - 9781555819088 U1 - QW525 PY - 2016/// CY - Washington, DC : PB - ASM Press KW - Microbiological Techniques KW - Medical - Clinical Medicine KW - Medical - Diseases KW - Medical - Internal Medicine KW - Diagnostic microbiology KW - Molecular microbiology N1 - 1.Nucleic Acid Amplification Methods Overview /​ Carl T. Wittwer 2.Application of Identification of Bacteria by DNA Target Sequencing in a Clinical Microbiology Laboratory /​ Cathy A. Petti 3.Microbial Whole-Genome Sequencing: Applications in Clinical Microbiology and Public Health /​ S. J. Peacock 4.Digital PCR and Its Potential Application to Microbiology /​ Alexandra S. Whale 5.Massively Parallel DNA Sequencing and Microbiology /​ David Persing 6.Next-Generation Sequencing /​ Steve Miller 7.Pathogen Discovery /​ David Wang 8.Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Microbial Identification in Clinical Microbiology /​ Robin Patel 9.Multiplex Technologies /​ Melissa B. Miller Section II METAGENOMICS: IMPLICATIONS FOR DIAGNOSTICS 10.The Skin Microbiome: Insights into Potential Impact on Diagnostic Practice /​ Elizabeth A. Grice Contents note continued: 11.The Gastrointestinal Microbiome /​ Ruth Ann Luna 12.The Vaginal Microbiome /​ David N. Fredricks 13.Microbial Communities of the Male Urethra /​ David E. Nelson 14.The Human Virome in Health and Disease /​ Gregory A. Storch Section III HEALTH CARE-ASSOCIATED INFECTIONS 15.Molecular Detection of Staphylococcus aureus Colonization and Infection /​ Lance R. Peterson 16.Molecular Diagnostics for Clostridium difficile /​ Curtis J. Donskey 17.Overview of Molecular Diagnostics in Multiple-Drug-Resistant Organism Prevention: Focus on Multiple-Drug-Resistant Gram-Negative Bacterial Organisms /​ Daniel J. Diekema 18.Detection of Vancomycin-Resistant Enterococci /​ Barbara M. Willey Section IV MOLECULAR DIAGNOSTICS AND PUBLIC HEALTH 19.The Impact of Molecular Diagnostics on Surveillance of Foodborne Infections /​ Peter Gerner-Smidt Contents note continued: 20.Role of Molecular Methods in Improving Public Health Surveillance of Infections Caused by Antimicrobial-Resistant Bacteria in Health Care and Community Settings /​ Fred C. Tenover 21.Molecular Diagnostics: Huge Impact on the Improvement of Public Health in China /​ Shuguang Li 22.Surveillance and Epidemiology of Norovirus Infections /​ John P. Harris 23.Molecular Diagnostic Assays for the Detection and Control of Zoonotic Diseases /​ J. Scott Weese Section V SYNDROMIC DIAGNOSTICS 24.Molecular Approaches to the Diagnosis of Meningitis and Encephalitis /​ Yi-Wei Tang 25.Using Nucleic Acid Amplification Techniques in a Syndrome-Oriented Approach: Detection of Respiratory Agents /​ Margareta Ieven 26.Molecular and Mass Spectrometry Detection and Identification of Causative Agents of Bloodstream Infections /​ Gilbert Greub 27.Molecular Diagnosis of Gastrointestinal Infections /​ Niaz Banaei Contents note continued: 28.Diagnostic Approaches to Genitourinary Tract Infections /​ Jeffrey D. Klausner 29.Syndromic Diagnostic Approaches to Bone and Joint Infections /​ Alexander J. McAdam Section VI VIROLOGY 30.Molecular Detection and Characterization of Human Immunodeficiency Virus Type 1/​417 /​ Colleen S. Kraft 31.Molecular Detection and Characterization of Hepatitis C Virus /​ Alexandra Valsamakis 32.Molecular Detection and Characterization of Hepatitis B Virus /​ Joseph D. C. Yao 33.Molecular Detection of Human Papillomaviruses /​ Elizabeth R. Unger 34.Molecular Diagnostics for Viral Infections in Transplant Recipients /​ Raymund R. Razonable Section VII FUNGI AND PROTOZOA 35.Molecular Detection and Identification of Fungal Pathogens /​ Marie Pierre Hayette 36.Molecular Approaches for Diagnosis of Chagas' Disease and Genotyping of Trypanosoma cruzi /​ Michel Tibayrenc Contents note continued: 37.Molecular Approaches for Diagnosis of Malaria and the Characterization of Genetic Markers for Drug Resistance /​ Laura Ciuffreda 38.Molecular Detection of Gastrointestinal Parasites /​ C. Rune Stensvold Section VIII POINT-OF-CARE/​NEAR-CARE DIAGNOSTICS 39.Molecular Diagnostics and the Changing Face of Point-of-Care /​ Anne M. Whalen 40.Point-of-Care Technologies for the Diagnosis of Active Tuberculosis /​ Grant Theron 41.Molecular Diagnostics for Use in HIV/​AIDS Care and Treatment in Resource-Limited Settings /​ Maurine M. Murtagh 42.Rapid Point-of-Care Diagnosis of Malaria and Dengue Infection /​ Jan Jacobs Section IX THE HOST AND HOST RESPONSE 43.Implications of Pharmacogenetics for Antimicrobial Prescribing /​ David W. Haas 44.Exploiting MicroRNA (miRNA) Profiles for Diagnostics /​ Ralph A. Tripp 45.Host Response in Human Immunodeficiency Virus Infection /​ Amalio Telenti Contents note continued: 46.Biomarkers of Gastrointestinal Host Responses to Microbial Infections /​ David B. Haslam Section X INFORMATION TECHNOLOGY 47.Point-of-Care Medical Device Connectivity: Developing World Landscape /​ Jeff Baker 48.WHONET: Software for Surveillance of Infecting Microbes and Their Resistance to Antimicrobial Agents /​ Thomas F. O'Brien 49.Cloud-Based Surveillance, Connectivity, and Distribution of the GeneXpert Analyzers for Diagnosis of Tuberculosis (TB) and Multiple-Drug-Resistant TB in South Africa /​ Lesley E. Scott Section XI QUALITY ASSURANCE 50.Molecular Method Verification /​ Elizabeth M. Marlowe 51.Molecular Microbiology Test Quality Assurance and Monitoring /​ Matthew J. Bankowski 52.Proficiency Testing and External Quality Assessment for Molecular Microbiology /​ Roberta M. Madej 53.Practices of Sequencing Quality Assurance /​ David M. Dinauer Contents note continued: 54.Verification and Validation of Matrix-Assisted Laser Desorption Ionization Time of Flight Mass Spectrometry-Based Protocols /​ Nathan A. Ledeboer Section XII THE BUSINESS OF DIAGNOSTICS 55.Improved Diagnostics in Microbiology: Developing a Business Case for Hospital Administration /​ Mark Larocco 56.Molecular Diagnostics and the Changing Legal Landscape /​ Jeffrey M. Libby ER -